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Smile

Smile is a method for efficiently inferring structured motifs in a set of sequences. All the details concerning the algorithm are described in “Marsan, L., and Sagot M.-F. Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. Journal of Computational Biology, 7(3-4 ):345-362, 2000.”

Contact: Marie-France Sagot

Permanent link to this article: https://team.inria.fr/erable/en/software/smile/