Cassis implements a suite of methods for the precise detection of genomic rearrangement breakpoints, which were described in “Lemaitre, C., Tannier, E., Gautier, C., and Sagot, M.-F. (2008). Precise detection of rearrangement breakpoints in mammalian chromosomes. BMC Bioinformatics, 9(286).”
Contact: Christian Baudet, Claire Lemaitre and Marie-France Sagot