Reproducibility

Contents

research_repro

Our Publications

Publications HAL de camille,maumet de la structure empenn

2023

Journal articles

ref_biblio
Elodie Germani, Elisa Fromont, Camille Maumet. On the benefits of self-taught learning for brain decoding. GigaScience, 2023, 12, pp.1-17. ⟨10.1093/gigascience/giad029⟩. ⟨hal-03769993v6⟩
Accès au texte intégral et bibtex
https://inria.hal.science/hal-03769993/file/on_the_benefits_of_self_taught_learning.pdf BibTex
ref_biblio
Aya Kabbara, Nina Forde, Camille Maumet, Mahmoud Hassan. Successful reproduction of a large EEG study across software packages. Neuroimage: Reports, In press, 3 (2), pp.100169. ⟨10.1016/j.ynirp.2023.100169⟩. ⟨inserm-03747289⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03747289/file/Kabbara_1-s2.0-S2666956023000144-main.pdf BibTex

Conference papers

ref_biblio
Jeremy Lefort-Besnard, Thomas E Nichols​, Camille Maumet. Systematic review and evaluation of meta-analysis methods for same data meta-analyses. Cogbases-2023 – Workshop on open science methods for analyzing brain imaging data, Institut Pasteur, Paris; Parietal team, Inria, Paris Saclay, Oct 2023, Paris, France. pp.1-1. ⟨inserm-04222730⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-04222730/file/cogbases23_abstract.pdf BibTex

Poster communications

ref_biblio
Elodie Germani, Elisa Fromont, Camille Maumet. Exploring variability patterns in the task-fMRI analytical space. OHBM 2023 – 29th Annual Meeting of the Organization for Human Brain Mapping, Jul 2023, Montreal, Canada. ⟨hal-03991042⟩
Accès au texte intégral et bibtex
https://inria.hal.science/hal-03991042/file/abstract_OHBM.pdf BibTex
ref_biblio
Elodie Germani, Elisa Fromont, Camille Maumet. Representation learning for more reproducible fMRI data analyses. IABM 2023 – Colloque Français d’Intelligence Artificielle en Imagerie Biomédical, Mar 2023, Paris, France. pp.1. ⟨hal-04068797⟩
Accès au texte intégral et bibtex
https://inria.hal.science/hal-04068797/file/poster_elodiegermani.pdf BibTex

Preprints, Working Papers, …

ref_biblio
Elodie Germani, Elisa Fromont, Pierre Maurel, Camille Maumet. The HCP multi-pipeline dataset: an opportunity to investigate analytical variability in fMRI data analysis. 2023. ⟨inserm-04356768⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-04356768/file/main.pdf BibTex

2022

Journal articles

ref_biblio
Freya Acar, Camille Maumet, Talia Heuten, Maya Vervoort, Han Bossier, et al.. Review Paper: Reporting Practices for Task fMRI Studies. Neuroinformatics, 2022, ⟨10.1007/s12021-022-09606-2⟩. ⟨inserm-03800029⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03800029/file/Review%20paper_reporting%20practices%20for%20fMRI%20studies_Acaretal_Neuroinformatics.pdf BibTex
ref_biblio
Guiomar Niso, Rotem Botvinik-Nezer, Stefan Appelhoff, Alejandro de La Vega, Oscar Esteban, et al.. Open and reproducible neuroimaging: from study inception to publication. NeuroImage, 2022, ⟨10.1016/j.neuroimage.2022.119623⟩. ⟨inserm-03646706⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03646706/file/Open%20and%20reproducible%20neuroimage_2022.pdf BibTex
ref_biblio
Alexander Bowring, Thomas Nichols, Camille Maumet. Isolating the Sources of Pipeline-Variability in Group-Level Task-fMRI results. Human Brain Mapping, 2022, 43 (3), pp.1112-1128. ⟨10.1002/hbm.25713⟩. ⟨inserm-03323001⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03323001/file/2021.07.27.453994v1.full.pdf BibTex

Conference papers

ref_biblio
Xavier Rolland, Pierre Maurel, Camille Maumet. Towards efficient fmri data re-use: can we run between-group analyses with datasets processed differently with spm ?. ISBI 2022 – IEEE International Symposium on Biomedical Imaging, Mar 2022, Calcutta, India. pp.1-4. ⟨hal-03607384⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03607384/file/ISBI_R_vision-1.pdf BibTex

Poster communications

ref_biblio
Elodie Germani, Camille Maumet. FMRI data analysis: How does analytical variability vary with sample size?. OHBM 2022 – 28th Annual Meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom. pp.1-5. ⟨inserm-03642535⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03642535/file/abstract_analytical_variability_sample_size_egermani_cmaumet.pdf BibTex

2021

Journal articles

ref_biblio
Elizabeth Levitis, Cassandra Gould van Praag, Remi Gau, Stephan Heunis, Elizabeth Dupre, et al.. Centering inclusivity in the design of online conferences – An OHBM – Open Science perspective. GigaScience, 2021, 10 (8), ⟨10.1093/gigascience/giab051⟩. ⟨inserm-03221005⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03221005/file/giab051.pdf BibTex
ref_biblio
Patricia Clement, Thomas Booth, Fran Borovečki, Kyrre E. Emblem, Patrícia Figueiredo, et al.. GliMR: Cross-Border Collaborations to Promote Advanced MRI Biomarkers for Glioma. Journal of Medical and Biological Engineering, 2021, 41 (2), pp.115-125. ⟨10.1007/s40846-020-00582-z⟩. ⟨inserm-03039808⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03039808/file/Clement2020_Article_GliMRCross-BorderCollaboration.pdf BibTex
ref_biblio
Rémi Gau, Stephanie Noble, Katja Heuer, Katherine Bottenhorn, Isil Bilgin, et al.. Brainhack: Developing a culture of open, inclusive, community-driven neuroscience. Neuron, 2021, 109 (11), pp.1769-1775. ⟨10.1016/j.neuron.2021.04.001⟩. ⟨inserm-03221248⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03221248/file/Gau%20et%20al.%20-%202021%20-%20Brainhack%20Developing%20a%20culture%20of%20open%2C%20inclusive.pdf BibTex
ref_biblio
Elise Bannier, Gareth Barker, Valentina Borghesani, Nils Broeckx, Patricia Clement, et al.. The Open Brain Consent : Informing research participants and obtaining consent to share brain imaging data. Human Brain Mapping, 2021, 42 (7), pp.1945-1951. ⟨10.1002/hbm.25351⟩. ⟨inserm-03128167⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03128167/file/hbm.25351.pdf BibTex

Conference papers

ref_biblio
Christopher Markiewicz, Katherine Bottenhorn, Gang Chen, Alejandro de La Vega, Oscar Esteban, et al.. BIDS Statistical Models – An implementation-independent representation of General Linear Models. OHBM 2021 – 27th Annual Meeting of the Organization for Human Brain Mapping, Jun 2021, Online, South Korea. pp.1-4. ⟨inserm-03478963⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03478963/file/OHBM2021-Bids-stats-models.pdf BibTex
ref_biblio
Alexander Bowring, Thomas Nichols, Camille Maumet. Identifying sources of software-dependent differences in task fMRI analyses. OHBM 2021 – 27th Annual Meeting of the Organization for Human Brain Mapping, Jun 2021, Online, South Korea. pp.1-4. ⟨inserm-03479022⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03479022/file/OHBM%202021_%20Software%20Comparison%20Abstract.pdf BibTex
ref_biblio
Rémi Adon, Stefan Appelhoff, Tibor Auer, Laurent Guillo, Yaroslav O Halchenko, et al.. BIDS-prov: a provenance framework for BIDS. OHBM 2021 – 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2021, Online, South Korea. pp.1-3. ⟨inserm-03478998⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-03478998/file/OHBM2021-Bids-prov.pdf BibTex

2020

Journal articles

ref_biblio
Rotem Botvinik-Nezer, Felix Holzmeister, Colin F Camerer, Anna Dreber, Juergen Huber, et al.. Variability in the analysis of a single neuroimaging dataset by many teams. Nature, 2020, 582 (7810), pp.84-88. ⟨10.1038/s41586-020-2314-9⟩. ⟨inserm-02914443⟩
Accès au bibtex
BibTex

Conference papers

ref_biblio
Camille Maumet. Open Science in action: Doing research as a community!. OHBM 2020 – 26th Annual Meeting of the Organization for Human Brain Mapping, Jun 2020, Virtual, Canada. pp.1-19. ⟨inserm-02909437⟩
Accès au texte intégral et bibtex
https://inserm.hal.science/inserm-02909437/file/OHBM2020%20-%20Camille%20Maumet%20-%20OS-SIG%20symposium.pdf BibTex

Image credit: Jeremy Lefort-Besnard with wordcloud Python package.

Comments are closed.