A-purva: Contact Map Overlap solver
Description A_purva is a Contact Map Overlap maximization (CMO) solver. Given two protein structures represented by two contact maps, A_purva computes the amino-acid alignment which maximize the number of common contacts. Reference N. Malod-Dognin, N. Yanev. R. Andonov, Comparing Protein 3D Structures Using A_purva, INTIA Research Report RR 7464, 2010 abstract: Structural similarity between proteins …