Quantitative BioImaging 2019

Videos of Workshops
Machine Learning in Bioimaging Analysis and Microscopy
  • Seth Flaxman: Machine learning workshop: an introduction to machine learning and a taste of advanced methods  / Part 1 videoPart 2 video
  • Christophe Zimmer: Introduction to deep learning / video
  • Julien Mairal: Large-scale optimization for machine learning / video
3D Single Molecule Microscopy Data analysis
  • Daniel Sage:  Introduction of techniques for 3D SMLM and software / video
  • Jonas Ries:  3D fitting with SMAP / video
  • Benoit Lelandais: Zernicke Optimized Localization Algorithm ZOLA – 3D / video
  • Anish V. Abraham:  Presentation of MIATool / video
Videos of Key-Note Speakers
  • Michael Elad: Sparse Modeling of Data and Deep Learning / video
  • Frederick Maxfield: Using Microscopy to Dissect Endolysosomal Trafficking and Function / video
  • Ernst H.K. StelzerAnalyzing Three-Dimensional Biological Specimens Observed with Light Sheet Microscopy under Near-Natural Conditionsvideo
  • Rainer Heintzmann:  Structured Illumination, Past and Present Development / video
QBI Sessions

 

Lecture — MACHINE LEARNING Theme

  • Florian Jug: Content-Aware Image Restoration for Light and Electron Microscopy / video

Lecture — SINGLE MOLECULE MICROSCOPY Theme

  • Silvio Rizzoli: Fixation and Sample Processing Issues for Super-Resolution  / video

Lecture — SOFTWARE DESIGN FOR IMAGE ANALYSIS Theme

  • Kevin E. Eliceiri: The ImageJ ecosystem: an open platform for biomedical image analysis / video

Lecture — PAST CHAIR

  • Jörg Enderlein: About the Optimal Transfer Function of a Microscope  / video

Pair talks — ANALYSIS OF ENDOSOMES DYNAMICS IN LIVE CELL IMAGING

  • Marino Zerial: Structure and Dynamics of Endosomes Analyzed by Imaging-based Methods  / video
  • Yannis Kalaidzidis: Tracking Endosomes in Hippocampal Neurons / video

Minisymposium — MACHINE LEARNING IN BIOIMAGE ANALYSIS AND MICROSCOPY

  • Gregory R. Johnson: Label-Free Prediction of Subcellular Organization: Capturing Variation and Integrating Observations / video
  • Christophe Zimmer: Computational Boosts to Single Molecule Localization Microscopy / video

Tutorials

  • Edward Cohen: Spatial Statistics for Microscopy Data  / video
  • Judith Klumperman : Correlative Light – Electron Microscopy: Approaches, Applications and Outlook  / video

Session — SINGLE MOLECULE MICROSCOPY

  • Bernd Rieger: Data Fusion for Localization Microscopy / video
  • Jonas Ries: Nuclear Pores as Universal Reference Standards for Quantitative Microscopy / video
  • Richard John Marsh: Artefact Free High Density Localization Microscopy Analysis / video

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