Meetings

2022

3-4 May: meeting at Inria

participants: Ton Bunt (online), Mathieu Desroches, Tamas Fülöp (online) and Serafim Rodrigues.
objectives: discussing a grant proposal on Alzheimer’s Disease and molecular interactions involving Amyloid-β.

9-13 May: meeting at Inria

participants: Mathieu Desroches, Serafim Rodrigues and Mattia Sensi.
objectives: discussing an article on modeling vesicle cycle (exocytosis as well as endocytosis) with a multiple-timescale approach.

2021

16-25 October: meeting in Bilbao

participants: Mathieu Desroches, Tamas Fülöp (online) and Serafim Rodrigues.
objectives: discussing an article on immunosenescence in which we incorporate an idealized multiple-timescale model differentiating between chronological age and biological age.

2020

2-16 March: meeting at Inria

participants: Mathieu Desroches, Guillaume Girier (online), Tamas Fülöp (online), Martin Krupa, Serafim Rodrigues and Fernando Nóbrega Santos (online)
objectives: discussing an opinion article on new data-analytical techniques in ageing studies; discussing the Master’s project of Guillaume Girier; discussing the extended synapse model, in particular the link to experimental data.

1-20 July: meeting at BCAM

participants: Mathieu Desroches, Tamas Fülöp (online), Serafim Rodrigues and Fernando Nóbrega Santos (online)
objective: preparing for a grant proposal on Alzheimer’s Disease.

30 July – 19 August: meeting at BCAM

participants: Mathieu Desroches, Tamas Fülöp (online), Serafim Rodrigues and Fernando Nóbrega Santos (online)
objective: preparing for a grant proposal on Alzheimer’s Disease.
funding: BCAM

24 September – 4 October: meeting at BCAM

participants: Mathieu Desroches, Guillaume Girier and Serafim Rodrigues
objective: discussing the beginning of Guillaume Girier’s PhD.

21 October – 4 November: meeting at Inria

participants: Fabien Campillo, Mathieu Desroches, Martin Krupa, Louisiane Lemaire and Serafim Rodrigues
objective: discussing a markov-state model for genetically-mutated sodium channel as part of Louisiane Lemaire’s PhD.

2019

10-14 June: BCAM mini-course by Fabien Campillo

Introduction to Piecewise Deterministic Markov Processes and applications to Neuroscience (webpage)
This 10-hour mini-course was followed by local, national and international Phd students and postdocs. It was aimed as an introduction to PDMPs for non-probabilists with a view towards neural dynamics, action potential generation and synaptic plasticity.
participants for NeuroTransSF: Mathieu Desroches and Serafim Rodrigues
Objectives for NeuroTransSF: discussing the possibility to adapt the multi-scale framework for differential neurotransmitter release to a stochastic environment.

22-26 July: meeting at BCAM

participants: Mathieu Desroches, Martin Krupa and Serafim Rodrigues
objective: discussing a preliminary extension of our multi-scale neurotransmitter release model (PNAS, 2016) to capture differential endocytosis. A minimal extension was derived and simulated; initial simulations were gathered in a working document.

21-31 August: meeting at Inria

participants: Fabien Campillo (part.), Mathieu Desroches, Guillaume Girier (part.), Louisiane Lemaire (part.), Martin Krupa and Serafim Rodrigues
objective: pursuing the simulation of the embryo of full vesicle cycle model aimed at capture differential exocytosis as well as endocytosis (kiss-n-stay vs kiss-n-run scenarios); summer internship of Guillaume Girier on a slow-fast analysis of a neural population model with synaptic resources.

28 September – 1 October: meeting at BCAM

participants: Mathieu Desroches and Serafim Rodrigues
objectives: connecting our “local” vesicle cycle model to questions related to early signs of Alzheimer’s Disease in the context of a collaboration with micro-biologists and clinicians from the University of Sherbrooke (Canada).

4 – 14 November: meeting in Bilbao and Montréal (Canada)

participants: Mathieu Desroches, Tamas Fülöp and Serafim Rodrigues
objectives: participating to and giving a talk at the international symposium Biology of Aging: How to better intervene co-organised by Tamas Fülöp; we also discussed about a review article on Alzheimer’s Disease published in 2020 (see Publication page).
funding: BCAM

2022

3-4 May: meeting at Inria

participants: Ton Bunt (online), Mathieu Desroches, Tamas Fülöp (online) and Serafim Rodrigues.

objectives: discussing a grant proposal on Alzheimer’s Disease and molecular interactions involving Amyloid-β.

9-13 May: meeting at Inria

participants: Mathieu Desroches, Serafim Rodrigues and Mattia Sensi.

objectives: discussing an article on modeling vesicle cycle (exocytosis as well as endocytosis) with a multiple-timescale approach.

2021

16-25 October: meeting in Bilbao

participants: Mathieu Desroches, Tamas Fülöp (online) and Serafim Rodrigues.

objectives: discussing an article on immunosenescence in which we incorporate an idealized multiple-timescale model differentiating between chronological age and biological age.

2020

2-16 March: meeting at Inria

participants: Mathieu Desroches, Guillaume Girier (online), Tamas Fülöp (online), Martin Krupa, Serafim Rodrigues and Fernando Nóbrega Santos (online)

objectives: discussing an opinion article on new data-analytical techniques in ageing studies; discussing the Master’s project of Guillaume Girier; discussing the extended synapse model, in particular the link to experimental data.

1-20 July: meeting at BCAM

participants: Mathieu Desroches, Tamas Fülöp (online), Serafim Rodrigues and Fernando Nóbrega Santos (online)

objective: preparing for a grant proposal on Alzheimer’s Disease.

30 July – 19 August: meeting at BCAM

participants: Mathieu Desroches, Tamas Fülöp (online), Serafim Rodrigues and Fernando Nóbrega Santos (online)

objective: preparing for a grant proposal on Alzheimer’s Disease.

funding: BCAM

24 September – 4 October: meeting at BCAM

participants: Mathieu Desroches, Guillaume Girier and Serafim Rodrigues

objective: discussing the beginning of Guillaume Girier’s PhD.

21 October – 4 November: meeting at Inria

participants: Fabien Campillo, Mathieu Desroches, Martin Krupa, Louisiane Lemaire and Serafim Rodrigues

objective: discussing a markov-state model for genetically-mutated sodium channel as part of Louisiane Lemaire’s PhD.

2019

10-14 June: BCAM mini-course by Fabien Campillo

Introduction to Piecewise Deterministic Markov Processes and applications to Neuroscience (webpage)

This 10-hour mini-course was followed by local, national and international Phd students and postdocs. It was aimed as an introduction to PDMPs for non-probabilists with a view towards neural dynamics, action potential generation and synaptic plasticity.

participants for NeuroTransSF: Mathieu Desroches and Serafim Rodrigues

Objectives for NeuroTransSF: discussing the possibility to adapt the multi-scale framework for differential neurotransmitter release to a stochastic environment.

22-26 July: meeting at BCAM

participants: Mathieu Desroches, Martin Krupa and Serafim Rodrigues

objective: discussing a preliminary extension of our multi-scale neurotransmitter release model (PNAS, 2016) to capture differential endocytosis. A minimal extension was derived and simulated; initial simulations were gathered in a working document.

21-31 August: meeting at Inria

participants: Fabien Campillo (part.), Mathieu Desroches, Guillaume Girier (part.), Louisiane Lemaire (part.), Martin Krupa and Serafim Rodrigues

objective: pursuing the simulation of the embryo of full vesicle cycle model aimed at capture differential exocytosis as well as endocytosis (kiss-n-stay vs kiss-n-run scenarios); summer internship of Guillaume Girier on a slow-fast analysis of a neural population model with synaptic resources.

28 September – 1 October: meeting at BCAM

participants: Mathieu Desroches and Serafim Rodrigues

objectives: connecting our “local” vesicle cycle model to questions related to early signs of Alzheimer’s Disease in the context of a collaboration with micro-biologists and clinicians from the University of Sherbrooke (Canada).

4 – 14 November: meeting in Bilbao and Montréal (Canada)

participants: Mathieu Desroches, Tamas Fülöp and Serafim Rodrigues

objectives: participating to and giving a talk at the international symposium Biology of Aging: How to better intervene co-organised by Tamas Fülöp; we also discussed about a review article on Alzheimer’s Disease published in 2020 (see Publication page).

funding: BCAM