Description
SLICEE is a workflow environment to capture data parallelism on intensive bioinformatics computation. This software proposes (1) to abstract the calls to the cluster scheduler by handling command submission; (2) to take care of exploiting the data parallelism with data specific methods; (3) to manage data using a cache references mecanism and route data between tasks
Reference
J. Piat, F. Moreews, O. Salou, On Demand Bioinformatics Intensive Workflow Execution Environment, Bioinformatics Open Source Conference – 07 16 2011 – Vienna
Inria
IRISA